STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0213Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (277 aa)    
Predicted Functional Partners:
CAAU_0212
Rod shape-determining protein MreB.
 
 
 0.997
CAAU_0381
MreB-like protein (Mbl protein).
 
 
 0.990
CAAU_0214
Hypothetical protein.
  
 
 0.989
CAAU_0215
Penicillin-binding protein 2 (PBP-2).
 
 
 0.986
CAAU_0211
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.972
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.960
CAAU_0219
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
  
 0.934
CAAU_0210
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.932
CAAU_0217
Septum site-determining protein MinD.
  
    0.917
CAAU_1273
Cell division protein FtsI [Peptidoglycan synthetase].
 
 
 0.853
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.