STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0590Binding-protein-dependent transport systems inner membrane component. (293 aa)    
Predicted Functional Partners:
CAAU_0589
N-Acetyl-D-glucosamine ABC transport system,permease protein 2.
 0.993
CAAU_2072
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.982
CAAU_0578
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE.
 0.981
CAAU_1121
Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 0.981
CAAU_0591
ABC transporter, sugar binding protein.
 0.972
CAAU_1528
N-Acetyl-D-glucosamine ABC transport system,permease protein 2.
 0.971
CAAU_0576
Maltose/maltodextrin ABC transporter, permease protein MalG.
 0.968
CAAU_0149
Possible alpha-xyloside ABC transporter, permease component.
 0.960
CAAU_2079
Sugar ABC transporter.
 0.937
CAAU_1935
Possible alpha-xyloside ABC transporter, permease component.
 0.935
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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