STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0618Possible tetrapyrrole methyltransferase domain / Nucleoside triphosphate pyrophosphohydrolase MazG. (228 aa)    
Predicted Functional Partners:
CAAU_0617
Nucleoside triphosphate pyrophosphohydrolase MazG.
     0.965
CAAU_0616
Nucleoside triphosphate pyrophosphohydrolase MazG.
     0.959
CAAU_0433
TPR repeat.
    
  0.905
CAAU_0620
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT).
      0.834
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.763
CAAU_0619
Stage V sporulation protein B.
 
    0.712
CAAU_0699
Uridine kinase.
    
  0.655
CAAU_1243
Manganese-dependent inorganic pyrophosphatase.
    
  0.653
CAAU_1190
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
    
  0.631
CAAU_2714
GGDEF domain protein.
  
 
  0.621
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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