STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0797Phage portal protein. (522 aa)    
Predicted Functional Partners:
CAAU_0795
Phage terminase, large subunit.
  
 0.976
CAAU_0800
Putative capsid protein of prophage.
 
    0.968
CAAU_0794
Hypothetical protein.
 
    0.956
CAAU_0798
Prophage Clp protease-like protein; Belongs to the peptidase S14 family.
    0.949
CAAU_0807
Phage major tail tube protein.
 
   
 0.928
CAAU_0806
Bacteriophage tail sheath protein.
 
  
 0.924
CAAU_0811
Phage late control D family protein.
 
   
 0.883
CAAU_0815
Phage baseplate.
 
   
 0.878
CAAU_0816
Hypothetical protein.
 
  
 0.875
CAAU_0812
Phage baseplate assembly protein V.
 
   
 0.865
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.