STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_0908Hypothetical protein. (120 aa)    
Predicted Functional Partners:
CAAU_0909
DNA primase, phage associated.
 
     0.952
CAAU_0905
Phage protein.
 
     0.932
CAAU_0906
FIG006036: phage encoded DNA polymerase I.
 
     0.932
CAAU_0907
Phage antirepressor protein.
 
     0.905
CAAU_0904
Phage protein.
 
     0.886
CAAU_0903
Hypothetical protein.
 
   
 0.881
CAAU_1727
DNA repair exonuclease.
   
 0.845
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.842
CAAU_1728
Hypothetical protein.
   
 
 0.805
CAAU_1731
FIG00519001: hypothetical protein.
   
 
 0.805
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.