STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1107Alpha-mannosidase. (887 aa)    
Predicted Functional Partners:
CAAU_1108
Secernin 1.
       0.773
CAAU_1109
Phosphotransferase system, phosphocarrier protein HPr.
       0.639
CAAU_1110
Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
       0.630
CAAU_1106
PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component.
 
    0.596
CAAU_0859
Two-component response regulator yesN.
  
    0.558
CAAU_1103
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2:PRD.
 
    0.551
CAAU_0170
ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB; Belongs to the ClpA/ClpB family.
   
    0.449
CAAU_1111
Inorganic pyrophospatase PpaX.
       0.449
CAAU_1104
PTS system, fructose-specific IIA component.
 
    0.431
CAAU_0342
Response regulator receiver.
   
    0.430
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.