STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1132Hypothetical protein. (316 aa)    
Predicted Functional Partners:
CAAU_1131
COG2152 predicted glycoside hydrolase.
       0.783
CAAU_1133
Transcriptional regulator.
       0.732
CAAU_1127
(GlcNAc)2 ABC transporter, permease component 1.
       0.672
CAAU_1128
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.672
CAAU_1129
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1); Belongs to the ABC transporter superfamily.
       0.672
CAAU_1130
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1); Belongs to the ABC transporter superfamily.
       0.672
CAAU_1126
Extracellular solute-binding protein, family 5.
       0.615
CAAU_1134
Hypothetical protein.
       0.457
CAAU_1135
Hypothetical protein.
       0.444
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.