STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1265Putative cytoplasmic protein. (355 aa)    
Predicted Functional Partners:
CAAU_2572
D-Ornithine 4,5-aminomutase E subunit.
 
  
 0.916
CAAU_2573
D-Ornithine 4,5-aminomutase S subunit.
 
  
  0.914
CAAU_2576
2,4-diaminopentanoate dehydrogenase.
 
   
 0.782
CAAU_2574
2-amino-4-ketopentanoate thiolase, beta subunit.
 
   
 0.772
CAAU_2575
2-amino-4-ketopentanoate thiolase, alpha subunit.
 
     0.765
CAAU_2571
Probable reactivating factor for D-ornithine aminomutase.
 
     0.674
CAAU_0600
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
  0.638
arcA
Arginine deiminase.
    
  0.633
CAAU_0983
Hypothetical protein; Belongs to the arginase family.
  
  
  0.501
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.498
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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