STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1292Phosphate regulon sensor protein PhoR (SphS). (572 aa)    
Predicted Functional Partners:
CAAU_1291
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 0.999
CAAU_0637
Two-component response regulator.
 0.981
CAAU_0627
Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain).
 0.949
CAAU_0753
Response regulator receiver:Transcriptional regulatory protein-like.
 0.942
CAAU_2442
Two-component response regulator SA14-24.
 
 
 0.901
CAAU_0308
DNA-binding response regulator.
 0.898
CAAU_1692
Chemotaxis protein methyltransferase CheR.
 
 
  0.898
CAAU_0944
Response regulator receiver.
 0.895
CAAU_2257
Two-component response regulator.
 0.894
CAAU_1290
COG1496: Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.853
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.