STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1330Periplasmic binding protein/LacI transcriptional regulator. (330 aa)    
Predicted Functional Partners:
CAAU_1329
Fructokinase.
 
 
 0.767
CAAU_0123
PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component.
  
 
 0.754
CAAU_1486
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.649
CAAU_0361
Ribose 5-phosphate isomerase B.
    
 0.624
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
   0.577
CAAU_0120
Phosphocarrier protein of PTS system.
    
 
 0.534
CAAU_0491
Phosphotransferase system, phosphocarrier protein HPr.
    
 
 0.534
CAAU_1109
Phosphotransferase system, phosphocarrier protein HPr.
    
 
 0.534
CAAU_1327
Galactose-1-phosphate uridylyltransferase.
  
  
 0.534
CAAU_1328
Sucrose-phosphate synthase.
       0.528
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.