STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1469Putative membrane-bound metal-dependent hydrolase. (202 aa)    
Predicted Functional Partners:
CAAU_1557
6-carboxy-5,6,7,8-tetrahydropterin synthase; Queuosine biosynthesis QueD, PTPS-I / Folate biosynthesis protein PTPS-III, catalyzes a reaction that bypasses dihydroneopterin aldolase (FolB).
  
 
 0.821
CAAU_2026
Queuosine biosynthesis QueD, PTPS-I.
  
 
 0.821
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
  
 0.819
queC
Queuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
  
 
 0.816
CAAU_0062
Putative cytoplasmic protein.
  
 
 0.789
CAAU_2253
Ribonucleotide reductase of class III (anaerobic), large subunit.
  
 
 0.789
CAAU_1471
Putative histidinol phosphatase and related hydrolases of the PHP family.
       0.754
CAAU_2424
Hypothetical protein.
  
     0.746
CAAU_1467
Cell division protein FtsW; Belongs to the SEDS family.
       0.695
CAAU_1468
Cell division protein FtsI [Peptidoglycan synthetase].
       0.695
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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