STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1844COG4604: ABC-type enterochelin transport system,ATPase component. (86 aa)    
Predicted Functional Partners:
CAAU_0105
ABC-type Fe3+-siderophore transport system,permease 2 component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.995
CAAU_0106
ABC-type Fe3+-siderophore transport system,permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.995
CAAU_0107
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3).
 
 0.991
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
    
 0.878
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 
  0.877
CAAU_1864
Uroporphyrinogen-III methyltransferase / Uroporphyrinogen-III synthase.
     
 0.813
CAAU_1848
L-threonine 3-O-phosphate decarboxylase.
       0.804
CAAU_1850
Cobyrinic acid A,C-diamide synthase.
     
 0.792
CAAU_1845
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis.
       0.783
CAAU_1849
Threonine kinase in B12 biosynthesis.
       0.776
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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