STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_1937Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. (444 aa)    
Predicted Functional Partners:
CAAU_1936
FIG00647615: hypothetical protein.
 
     0.929
CAAU_1938
Beta-glucosidase.
    
 0.859
CAAU_1360
Endo-beta-1,3-glucanase.
 
   
 0.842
CAAU_1933
ABC-type sugar transport system, periplasmic component.
 
     0.678
CAAU_0148
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.665
CAAU_0586
Endo-1,4-beta-xylanase D; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.658
CAAU_0585
Beta-galactosidase.
  
 0.618
CAAU_1935
Possible alpha-xyloside ABC transporter, permease component.
       0.605
CAAU_1934
Possible alpha-xyloside ABC transporter, permease component.
       0.582
CAAU_2134
Hypothetical protein.
   
 
 0.554
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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