STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2029Possible subunit of benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase. (329 aa)    
Predicted Functional Partners:
CAAU_2028
Benzoyl-CoA reductase subunit BadG.
 0.996
queE
Queuosine Biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
    0.920
CAAU_2026
Queuosine biosynthesis QueD, PTPS-I.
 
    0.887
CAAU_0847
Benzoyl-CoA reductase subunit BadG.
 0.853
CAAU_0261
Activator of 2-hydroxyglutaryl-CoA dehydratase.
 0.789
queC
Queuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
       0.769
CAAU_1181
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
  
 0.718
CAAU_2032
ABC-type MDR transport system, ATPase component.
 
     0.554
CAAU_2033
HlyD family secretion protein.
 
     0.544
CAAU_2031
ABC-type multidrug transport system, permease component.
 
     0.543
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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