STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2321D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (374 aa)    
Predicted Functional Partners:
CAAU_0938
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation).
 
      0.894
CAAU_1273
Cell division protein FtsI [Peptidoglycan synthetase].
 
 0.844
CAAU_2329
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.789
CAAU_2322
Sporulation protein YtfJ.
  
    0.770
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
      0.738
CAAU_2323
Hypothetical protein.
  
    0.737
CAAU_2144
Multimodular transpeptidase-transglycosylase.
   
 
 0.666
CAAU_2326
FIG004556: membrane metalloprotease.
  
    0.648
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.630
CAAU_2320
Electron transfer subunit protein.
       0.602
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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