STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2357Glycine/sarcosine/betaine reductase protein A @ selenocysteine-containing. (109 aa)    
Predicted Functional Partners:
CAAU_2356
Glycine reductase component B gamma subunit @ selenocysteine-containing.
 
   
 0.978
CAAU_2360
Glycine reductase component B beta subunit / Glycine reductase component B alpha subunit.
 
   
 0.954
CAAU_2354
Glycine reductase component B gamma subunit @ selenocysteine-containing.
 
     0.934
CAAU_2353
Glycine/sarcosine/betaine reductase component C chain 1.
 
   
 0.926
CAAU_2352
Glycine/sarcosine/betaine reductase component C chain 2.
 
   
 0.921
CAAU_2363
GrdX protein.
 
   
 0.901
CAAU_2361
Thioredoxin.
 
   
 0.862
CAAU_2362
Thioredoxin reductase.
 
   
 0.790
selD
Selenide,water dikinase @ selenocysteine-containing; Synthesizes selenophosphate from selenide and ATP.
      
 0.546
CAAU_2140
Thioredoxin; Belongs to the thioredoxin family.
     
 0.500
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.