STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2411Phosphatidylethanolamine N-methyltransferase. (206 aa)    
Predicted Functional Partners:
CAAU_2410
Mll2627 protein.
 
  
 0.805
CAAU_0433
TPR repeat.
    
 0.711
CAAU_2434
NAD-reducing hydrogenase subunit HoxF.
    
 0.704
CAAU_0040
Radical SAM domain protein.
  
 
 0.642
CAAU_1542
Biotin-protein ligase / Biotin operon repressor.
     
 0.625
CAAU_0707
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.621
CAAU_2378
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
 
 0.590
CAAU_2409
Hypothetical protein.
       0.580
CAAU_0731
Acyl-CoA reductase LuxC.
  
 
 0.576
CAAU_1615
Glutamate synthase [NADPH] small chain.
  
 
 0.555
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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