Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2425Conserved hypothetical protein. (1447 aa)    
Predicted Functional Partners:
CAAU_2033
HlyD family secretion protein.
  
 0.964
CAAU_0089
Probable Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.953
CAAU_1545
Similar to ABC transporter (ATP-binding protein).
  
 
 0.780
CAAU_2424
Hypothetical protein.
 
     0.749
CAAU_0087
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.732
CAAU_0433
TPR repeat.
 
  
 0.679
CAAU_0943
Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain,possible membrane copper tolerance protein.
 
 
 0.669
CAAU_0013
ABC-2 type transporter.
 
   
 0.643
CAAU_0569
ATP-binding region, ATPase-like.
 
   
 0.607
CAAU_0245
FIG098404: Hypothetical protein.
 
 
 0.576
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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