STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2465Small acid-soluble spore protein, alpha-type SASP. (71 aa)    
Predicted Functional Partners:
gpr
Endopeptidase spore protease Gpr; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.790
CAAU_2148
Stage V sporulation protein AC (SpoVAC).
  
    0.769
CAAU_2147
Stage V sporulation protein AD (SpoVAD).
  
    0.767
CAAU_0620
Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT).
  
    0.748
CAAU_1287
RNA polymerase sporulation specific sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
    0.739
CAAU_2146
Stage V sporulation protein AE (SpoVAE).
  
    0.738
CAAU_2244
FIG007421: forespore shell protein.
  
     0.731
CAAU_0504
Stage IV sporulation protein.
  
     0.723
CAAU_2495
Stage IV sporulation protein B.
  
     0.720
CAAU_2515
Stage III sporulation protein AD.
  
     0.719
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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