STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAAU_2695CRISPR-associated RAMP protein, SSO1426 family. (247 aa)    
Predicted Functional Partners:
CAAU_2699
FIG00530175: hypothetical protein.
 
 
 0.987
CAAU_2678
CRISPR-associated RAMP protein, Csm4 family.
 
 
 0.960
CAAU_2693
DUF324 domain-containing protein.
 
     0.960
CAAU_2679
CRISPR-associated protein, Csm5 family.
 
 
 0.952
CAAU_2676
CRISPR-associated protein, Csm2 family.
  
 
 0.942
CAAU_2675
CRISPR-associated protein, Csm1 family.
 
 
 0.879
CAAU_2694
CRISPR-associated RAMP protein, SSO1426 family.
 
    
0.872
CAAU_2700
CRISPR-associated protein APE2256.
 
     0.803
CAAU_1029
CRISPR-associated protein TM1812.
 
     0.783
CAAU_2692
Hypothetical protein.
  
    0.767
Your Current Organism:
Caloramator australicus
NCBI taxonomy Id: 857293
Other names: C. australicus RC3, Caloramator australicus KCTC 5601, Caloramator australicus RC3, Caloramator australicus str. RC3, Caloramator australicus strain RC3, Caloramator sp. KCTC 5601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.