A0A2T3B8N1 protein (Amorphotheca resinae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T3B8N1

Methyltranfer_dom domain-containing protein. (607 aa)

Predicted Functional Partners:

A0A2T3B249

0.908

A0A2T3B582

0.870

A0A2T3AQZ9

0.862

A0A2T3BBD3

0.787

A0A2T3AY83

0.769

A0A2T3ATV7

0.566

A0A2T3B3D9

0.566

A0A2T3AWV9

0.546

A0A2T3AQP6

0.498

A0A2T3B6F7

0.498

Your Current Organism:

Amorphotheca resinae

NCBI taxonomy Id: 857342
Other names: A. resinae ATCC 22711, Amorphotheca resinae ATCC 22711, Hormoconis resinae ATCC 22711

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T3AQP6	A0A2T3AQZ9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
A0A2T3AQP6	A0A2T3ATV7	Uncharacterized protein.	DEP domain-containing protein.	0.997
A0A2T3AQP6	A0A2T3AWV9	Uncharacterized protein.	Peptidase_S24 domain-containing protein.	0.974
A0A2T3AQP6	A0A2T3AY83	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.976
A0A2T3AQP6	A0A2T3B249	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.997
A0A2T3AQP6	A0A2T3B3D9	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A2T3AQP6	A0A2T3B582	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A2T3AQP6	A0A2T3B6F7	Uncharacterized protein.	Uncharacterized protein.	0.955
A0A2T3AQP6	A0A2T3B8N1	Uncharacterized protein.	Methyltranfer_dom domain-containing protein.	0.498
A0A2T3AQP6	A0A2T3BBD3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.997
A0A2T3AQZ9	A0A2T3AQP6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.997
A0A2T3AQZ9	A0A2T3ATV7	WD_REPEATS_REGION domain-containing protein.	DEP domain-containing protein.	0.997
A0A2T3AQZ9	A0A2T3AWV9	WD_REPEATS_REGION domain-containing protein.	Peptidase_S24 domain-containing protein.	0.967
A0A2T3AQZ9	A0A2T3AY83	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.997
A0A2T3AQZ9	A0A2T3B249	WD_REPEATS_REGION domain-containing protein.	Zinc_ribbon_16 domain-containing protein.	0.998
A0A2T3AQZ9	A0A2T3B3D9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.997
A0A2T3AQZ9	A0A2T3B582	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A2T3AQZ9	A0A2T3B6F7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.978
A0A2T3AQZ9	A0A2T3B8N1	WD_REPEATS_REGION domain-containing protein.	Methyltranfer_dom domain-containing protein.	0.862
A0A2T3AQZ9	A0A2T3BBD3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.997