STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PHT1tRNA pseudouridine synthase. (346 aa)    
Predicted Functional Partners:
A0A1E3PP18
Pseudouridine synthase.
   
 0.801
A0A1E3PLY6
Putative rRNA pseudouridine synthase.
   
 0.779
A0A1E3PKE4
Mitochondrial ribosomal protein of the large subunit; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.764
A0A1E3PE16
Tryptophan synthase.
     
 0.730
A0A1E3PIH2
YVTN repeat-like/Quino protein amine dehydrogenase.
   
 
 0.653
A0A1E3PEC9
ATP binding cassette family member.
  
   0.630
A0A1E3PSD8
Nucleolar.
   
    0.630
A0A1E3PFS4
Putative DNA-directed RNA polymerase II subunit.
  
  
 0.629
A0A1E3PJ29
RBP11-like subunits of RNA polymerase.
  
  
 0.629
A0A1E3PHT0
IGPS-domain-containing protein.
     
 0.624
Your Current Organism:
Nadsonia fulvescens
NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.