STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PJK2DUF1760-domain-containing protein. (686 aa)    
Predicted Functional Partners:
A0A1E3PMC5
Uncharacterized protein.
    
 0.780
A0A1E3PIM3
Small nuclear ribonucleoprotein Sm D2.
    
 0.765
A0A1E3PN47
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.762
A0A1E3PNW6
Uncharacterized protein.
    
 0.756
A0A1E3PS12
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.733
A0A1E3PEB0
DNA polymerase.
   
 0.731
A0A1E3PCL2
Uncharacterized protein.
    
 0.717
A0A1E3PMF9
Small nuclear ribonucleoprotein G.
    
  0.717
A0A1E3PF61
ERCC4 domain-containing protein.
    
 0.705
A0A1E3PKM3
Putative small nuclear ribonucleo protein f.
    
  0.678
Your Current Organism:
Nadsonia fulvescens
NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958
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