A0A1E3PJU8 protein (Nadsonia fulvescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1E3PJU8

Uncharacterized protein. (680 aa)

Predicted Functional Partners:

A0A1E3PFQ1

0.807

A0A1E3PQG5

0.807

A0A1E3PSF5

0.739

A0A1E3PGH9

0.736

A0A1E3PQF1

0.721

A0A1E3PT39

0.721

A0A1E3PDX5

0.720

A0A1E3PTB6

0.720

A0A1E3PLS7

0.615

A0A1E3PSY3

0.615

Your Current Organism:

Nadsonia fulvescens

NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3PDX5	A0A1E3PJU8	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	Uncharacterized protein.	0.720
A0A1E3PFQ1	A0A1E3PJU8	HTH araC/xylS-type domain-containing protein.	Uncharacterized protein.	0.807
A0A1E3PFQ1	A0A1E3PLS7	HTH araC/xylS-type domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.426
A0A1E3PFQ1	A0A1E3PSY3	HTH araC/xylS-type domain-containing protein.	Uracil phosphoribosyltransferase.	0.426
A0A1E3PGH9	A0A1E3PJU8	SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.736
A0A1E3PJU8	A0A1E3PDX5	Uncharacterized protein.	6-phosphogluconate dehydrogenase C-terminal domain-like protein.	0.720
A0A1E3PJU8	A0A1E3PFQ1	Uncharacterized protein.	HTH araC/xylS-type domain-containing protein.	0.807
A0A1E3PJU8	A0A1E3PGH9	Uncharacterized protein.	SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.736
A0A1E3PJU8	A0A1E3PLS7	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.615
A0A1E3PJU8	A0A1E3PQF1	Uncharacterized protein.	Protein disulfide-isomerase.	0.721
A0A1E3PJU8	A0A1E3PQG5	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A1E3PJU8	A0A1E3PSF5	Uncharacterized protein.	HMG box domain-containing protein.	0.739
A0A1E3PJU8	A0A1E3PSY3	Uncharacterized protein.	Uracil phosphoribosyltransferase.	0.615
A0A1E3PJU8	A0A1E3PT39	Uncharacterized protein.	Thioredoxin-like protein.	0.721
A0A1E3PJU8	A0A1E3PTB6	Uncharacterized protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.720
A0A1E3PLS7	A0A1E3PFQ1	P-loop containing nucleoside triphosphate hydrolase protein.	HTH araC/xylS-type domain-containing protein.	0.426
A0A1E3PLS7	A0A1E3PJU8	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.615
A0A1E3PLS7	A0A1E3PQG5	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.426
A0A1E3PLS7	A0A1E3PSF5	P-loop containing nucleoside triphosphate hydrolase protein.	HMG box domain-containing protein.	0.595
A0A1E3PLS7	A0A1E3PSY3	P-loop containing nucleoside triphosphate hydrolase protein.	Uracil phosphoribosyltransferase.	0.824