STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PRD1RBR-type E3 ubiquitin transferase. (517 aa)    
Predicted Functional Partners:
A0A1E3PG00
Uncharacterized protein.
    
 0.920
A0A1E3PF72
Putative ubiquitin ligase subunit HrtA.
    
 0.914
A0A1E3PT18
Ubiquitin.
    
 0.903
A0A1E3PCM2
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
 
      0.899
A0A1E3PHM6
Translation initiation factor eIF-2B epsilon subunit.
 
      0.899
A0A1E3PD53
Polyubiquitin.
    
 0.889
A0A1E3PCJ5
Phosphatidylinositol-4-phosphate 5-kinase.
 
  
   0.872
A0A1E3PHP2
Ubiquitin-domain-containing protein.
    
 0.863
A0A1E3PSR8
Ubiquitin.
    
 0.863
A0A1E3PIB5
Uncharacterized protein.
   
 0.833
Your Current Organism:
Nadsonia fulvescens
NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958
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