A0A1E3PRR0 protein (Nadsonia fulvescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1E3PRR0

Ras-domain-containing protein. (206 aa)

Predicted Functional Partners:

A0A1E3PI15

0.942

A0A1E3PI11

0.941

A0A1E3PLU6

0.941

A0A1E3PND5

0.941

A0A1E3PSB6

0.936

A0A1E3PR26

0.935

A0A1E3PI72

0.932

A0A1E3PF34

0.920

A0A1E3PID5

0.907

A0A1E3PG81

0.889

Your Current Organism:

Nadsonia fulvescens

NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3PF34	A0A1E3PG81	Phosphatidylinositol 3-kinase VPS34.	Uncharacterized protein.	0.734
A0A1E3PF34	A0A1E3PID5	Phosphatidylinositol 3-kinase VPS34.	Putative rab GTPase Vps21/Ypt51.	0.925
A0A1E3PF34	A0A1E3PLU6	Phosphatidylinositol 3-kinase VPS34.	E3 ubiquitin-protein ligase PEP5.	0.610
A0A1E3PF34	A0A1E3PND5	Phosphatidylinositol 3-kinase VPS34.	RING-type domain-containing protein.	0.525
A0A1E3PF34	A0A1E3PRR0	Phosphatidylinositol 3-kinase VPS34.	Ras-domain-containing protein.	0.920
A0A1E3PG81	A0A1E3PF34	Uncharacterized protein.	Phosphatidylinositol 3-kinase VPS34.	0.734
A0A1E3PG81	A0A1E3PI11	Uncharacterized protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.498
A0A1E3PG81	A0A1E3PI15	Uncharacterized protein.	Vps8 domain-containing protein.	0.486
A0A1E3PG81	A0A1E3PID5	Uncharacterized protein.	Putative rab GTPase Vps21/Ypt51.	0.889
A0A1E3PG81	A0A1E3PLU6	Uncharacterized protein.	E3 ubiquitin-protein ligase PEP5.	0.616
A0A1E3PG81	A0A1E3PND5	Uncharacterized protein.	RING-type domain-containing protein.	0.624
A0A1E3PG81	A0A1E3PR26	Uncharacterized protein.	Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.	0.469
A0A1E3PG81	A0A1E3PRR0	Uncharacterized protein.	Ras-domain-containing protein.	0.889
A0A1E3PG81	A0A1E3PSB6	Uncharacterized protein.	CNH domain-containing protein.	0.491
A0A1E3PI11	A0A1E3PG81	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.498
A0A1E3PI11	A0A1E3PI15	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Vps8 domain-containing protein.	0.992
A0A1E3PI11	A0A1E3PI72	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.998
A0A1E3PI11	A0A1E3PID5	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Putative rab GTPase Vps21/Ypt51.	0.676
A0A1E3PI11	A0A1E3PLU6	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	E3 ubiquitin-protein ligase PEP5.	0.998
A0A1E3PI11	A0A1E3PND5	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	RING-type domain-containing protein.	0.998