A0A1E3PTA0 protein (Nadsonia fulvescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1E3PTA0

Nucleic acid-binding protein. (236 aa)

Predicted Functional Partners:

A0A1E3PR61

0.999

A0A1E3PGG5

0.998

A0A1E3PKE4

0.998

A0A1E3PP88

0.998

A0A1E3PSB3

0.998

A0A1E3PSS2

0.998

A0A1E3PNJ9

0.997

A0A1E3PR40

0.997

A0A1E3PD07

0.996

A0A1E3PF67

0.996

Your Current Organism:

Nadsonia fulvescens

NCBI taxonomy Id: 857566
Other names: N. fulvescens var. elongata DSM 6958, Nadsonia fulvescens var. elongata DSM 6958

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3PD07	A0A1E3PF67	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.989
A0A1E3PD07	A0A1E3PGG5	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Uncharacterized protein.	0.990
A0A1E3PD07	A0A1E3PKE4	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Mitochondrial ribosomal protein of the large subunit; Belongs to the bacterial ribosomal protein bL17 family.	0.997
A0A1E3PD07	A0A1E3PNJ9	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S16.	0.989
A0A1E3PD07	A0A1E3PP88	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein L13.	0.998
A0A1E3PD07	A0A1E3PR40	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Translation protein; Belongs to the universal ribosomal protein uL3 family.	0.999
A0A1E3PD07	A0A1E3PR61	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.989
A0A1E3PD07	A0A1E3PSB3	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Uncharacterized protein.	0.995
A0A1E3PD07	A0A1E3PSS2	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Uncharacterized protein.	0.996
A0A1E3PD07	A0A1E3PTA0	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	Nucleic acid-binding protein.	0.996
A0A1E3PF67	A0A1E3PD07	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	0.989
A0A1E3PF67	A0A1E3PGG5	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.989
A0A1E3PF67	A0A1E3PKE4	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial ribosomal protein of the large subunit; Belongs to the bacterial ribosomal protein bL17 family.	0.997
A0A1E3PF67	A0A1E3PNJ9	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein S16.	0.997
A0A1E3PF67	A0A1E3PP88	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L13.	0.998
A0A1E3PF67	A0A1E3PR40	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Translation protein; Belongs to the universal ribosomal protein uL3 family.	0.998
A0A1E3PF67	A0A1E3PR61	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.993
A0A1E3PF67	A0A1E3PSB3	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.997
A0A1E3PF67	A0A1E3PSS2	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.997
A0A1E3PF67	A0A1E3PTA0	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	Nucleic acid-binding protein.	0.996