STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IMG5_066570Splicing arginine serine-rich 4, putative. (243 aa)    
Predicted Functional Partners:
IMG5_162050
U1 small nuclear ribonucleoprotein 70 kDa, putative.
   
 0.948
IMG5_189690
RRM domain-containing protein.
   
0.944
IMG5_129800
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.928
IMG5_026660
Zinc finger protein, putative.
   
 0.763
IMG5_127010
Uncharacterized protein.
    
 0.744
IMG5_147760
RNA binding protein, putative.
    
 0.744
IMG5_148010
RNA binding motif protein 34, putative.
    
 0.744
IMG5_160840
RNA binding protein, putative.
    
 0.744
IMG5_185660
C3H1-type domain-containing protein.
    
 0.744
IMG5_003390
Nuclear cap-binding protein subunit 2.
   
 0.721
Your Current Organism:
Ichthyophthirius multifiliis
NCBI taxonomy Id: 857967
Other names: I. multifiliis strain G5, Ichthyophthirius multifiliis strain G5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.