Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
tauBABC-type taurine transport system, periplasmic component. (353 aa)    
Predicted Functional Partners:
tauC
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.995
tauA
ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.991
tauD1
Alkanesulfonate monooxygenase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin- dependent oxidoreductases.
 
    0.833
ntrB
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.832
CVAR_1661
ABC transport system permease protein.
 
  
 0.828
CVAR_0404
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.792
nrtA
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
  
 0.715
CVAR_1660
ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
 0.655
tauD2
Probable taurine catabolism dioxygenase.
 
  
 0.635
CVAR_2650
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.618
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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