STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsDAlpha-acetolactate decarboxylase. (243 aa)    
Predicted Functional Partners:
ilvB
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].
  
 
 0.954
CVAR_1004
Hypothetical protein; Threonine dehydrogenase and related Zn- dependent dehydrogenases.
     
 0.947
CVAR_1756
Hypothetical protein; Threonine dehydrogenase and related Zn- dependent dehydrogenases.
     
 0.944
ilvN
Acetolactate synthase, small (regulatory) subunit.
     
 0.911
pqo
Pyruvate dehydrogenase; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
 
  
 0.638
CVAR_0274
Putative secreted protein; Predicted membrane protein.
       0.524
CVAR_0272
Hypothetical protein; Aldo/keto reductases, related to diketogulonate reductase.
       0.521
scrB
Sucrose-6-phosphate hydrolase; Beta-fructosidases (levanase/invertase).
 
   
 0.470
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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