STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0421Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (264 aa)    
Predicted Functional Partners:
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 0.940
fadE3
Acyl-CoA dehydrogenases.
 
 0.892
CVAR_0419
Hypothetical protein; Predicted aminoglycoside phosphotransferase.
 
 
 0.885
CVAR_1655
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
 0.777
CVAR_2939
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.747
CVAR_0422
Hypothetical protein; Transcriptional regulator.
       0.721
CVAR_0035
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.661
CVAR_0426
Protein tyrosine/serine phosphatase.
 
 
   0.632
CVAR_0531
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.631
CVAR_1947
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.621
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.