STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0426Protein tyrosine/serine phosphatase. (267 aa)    
Predicted Functional Partners:
CVAR_0310
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.906
CVAR_0315
Protein-tyrosine phosphatase; Glycine/serine hydroxymethyltransferase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.906
CVAR_0371
Sulfate permease and related transporters (MFS superfamily).
   
   0.781
CVAR_0444
Putative secreted protein.
   
 
 0.675
CVAR_0567
Hypothetical protein.
   
 
 0.675
CVAR_2116
Putative secreted protein.
   
 
 0.675
CVAR_2131
Hypothetical protein; DnaJ-class molecular chaperone with C-terminal Zn finger domain.
   
 
 0.675
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.652
CVAR_0425
Putative membrane protein.
 
     0.644
CVAR_0421
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
   0.632
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.