STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0435Hypothetical protein; ABC-type sugar transport systems, ATPase components. (328 aa)    
Predicted Functional Partners:
CVAR_0433
Putative membrane protein; ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 
 0.859
bioN
ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 
 0.761
CVAR_1357
Hypothetical protein; ABC-type sugar transport systems, ATPase components.
 
     0.742
CVAR_1620
ABC-type sugar transport systems, ATPase components.
 
 
 0.732
CVAR_0405
ABC-type polar amino acid transport system, ATPase component.
  
     0.693
CVAR_0362
Hypothetical protein.
  
  
 0.629
ciuD
ABC-type sugar transport systems, ATPase components.
  
     0.615
CVAR_0095
Hypothetical protein; ABC-type antimicrobial peptide transport system, ATPase component.
  
    0.536
znuC
ABC-type sugar transport systems, ATPase components.
  
     0.499
CVAR_1939
Hypothetical protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
     0.497
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.