STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0522ABC-type sugar transport systems, ATPase components. (234 aa)    
Predicted Functional Partners:
CVAR_0521
ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.993
CVAR_0523
ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
  
 0.986
CVAR_0668
Putative membrane protein; ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.882
mntC
ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.870
mntA
ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.773
CVAR_0670
Putative secreted protein; ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.709
lacI
Transcriptional regulators.
       0.640
CVAR_0269
Zinc metallochaperone; Putative GTPases (G3E family).
     
 0.562
CVAR_0524
Putative membrane protein.
       0.554
zur
Fur DNA-binding transcription regulator; Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.501
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.