STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0642Hypothetical protein; Dihydroxynaphthoic acid synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (246 aa)    
Predicted Functional Partners:
fadB2
3-hydroxyacyl-CoA dehydrogenase.
 0.974
CVAR_2090
Acyl-CoA dehydrogenases.
 
 0.973
fadE3
Acyl-CoA dehydrogenases.
  
 0.969
fadE2
Acyl-CoA dehydrogenases.
  
 0.969
fadB3
3-hydroxyacyl-CoA dehydrogenase.
 0.967
fadB1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase.
 0.964
CVAR_2092
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 0.957
fadB4
3-hydroxyacyl-CoA dehydrogenase.
 0.953
gcdH
Acyl-CoA dehydrogenases.
  
 0.949
acx
Acyl-CoA dehydrogenases.
  
 0.949
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.