STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0765Transcriptional regulators. (274 aa)    
Predicted Functional Partners:
ptsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.855
CVAR_0766
Putative membrane protein; ABC-type uncharacterized transport system, permease component.
 
     0.709
ptsF
Phosphotransferase system, fructose-specific IIC component.
 
   
 0.663
siiB
Siderophore-interacting protein.
       0.445
sucR
Transcriptional regulators of sugar metabolism.
  
   
 0.429
CVAR_0433
Putative membrane protein; ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
    0.424
bioN
ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
    0.424
lacI
Transcriptional regulators.
  
  
 0.420
nagE
Phosphotransferase system IIA components.
 
  
 0.407
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.