STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0804Hypothetical protein; Predicted thioesterase. (166 aa)    
Predicted Functional Partners:
pks13
Polyketide synthase modules and related proteins.
  
 
 0.927
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 
 0.794
CVAR_0805
Hypothetical protein.
  
    0.768
CVAR_0803
Hypothetical protein; ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.744
CVAR_2885
Hypothetical protein.
 
  
 0.701
CVAR_0851
Hypothetical protein.
   
   0.543
CVAR_2468
Hypothetical protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.486
CVAR_0802
Hypothetical protein.
  
    0.478
CVAR_1083
Putative acyl carrier protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.457
lip3
Triacylglycerol lipase; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.
  
   
 0.435
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.