STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctTTRAP-type C4-dicarboxylate transport system, large permease component. (428 aa)    
Predicted Functional Partners:
dctQ
TRAP dicarboxylate transporter subunit.
  
 
 0.956
dctP2
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.929
CVAR_0949
Permeases of the major facilitator superfamily.
       0.685
CVAR_0946
Transposase for insertion sequence element; Transposase and inactivated derivatives.
       0.567
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 
 0.501
dctP1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.475
CVAR_0706
Transcriptional regulators.
 
     0.468
pepD
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
  0.424
CVAR_2470
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1B family.
   
 
  0.424
CVAR_2304
Transcriptional regulators.
 
     0.420
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.