STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_0957Hypothetical protein. (578 aa)    
Predicted Functional Partners:
CVAR_1453
Hypothetical protein.
  
     0.747
sepP
Putative serine proteinase precursor; Subtilisin-like serine proteases.
  
 
 0.699
CVAR_1696
Hypothetical protein.
  
     0.654
CVAR_1426
Highly conserved protein containing a thioredoxin domain.
    
 
 0.619
pks13
Polyketide synthase modules and related proteins.
  
 
 0.598
ftsK
Cell division protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
   
 
 0.588
CVAR_2303
Uncharacterized protein conserved in bacteria; Belongs to the WXG100 family.
 
 
 0.588
CVAR_1745
Putative secreted protein.
  
     0.583
CVAR_1083
Putative acyl carrier protein; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.575
CVAR_0407
Hypothetical protein.
  
     0.568
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.