STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1013Predicted transcriptional regulators. (221 aa)    
Predicted Functional Partners:
CVAR_1014
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis protein; Glycine/D-amino acid oxidases (deaminating).
 
    0.881
CVAR_1019
Hypothetical protein.
 
     0.798
CVAR_1023
Hypothetical protein.
 
     0.782
CVAR_1012
Hypothetical protein; Predicted glutamine amidotransferases.
  
  
 0.780
CVAR_2854
Uncharacterized protein related to capsule biosynthesis enzymes.
  
 
 0.602
CVAR_1022
Ferredoxin; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
     0.530
CVAR_1015
N-carbamoyl-L-amino-acid hydrolase; Acetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases.
       0.511
CVAR_1018
Ferredoxin; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
     0.506
CVAR_1020
Ethanolamine utilization protein.
 
     0.416
CVAR_2493
Hypothetical protein.
  
     0.413
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.