STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1046Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
CVAR_0656
Transcriptional regulators.
  
     0.555
fadB2
3-hydroxyacyl-CoA dehydrogenase.
       0.526
CVAR_0434
Predicted redox protein, regulator of disulfide bond formation.
  
  
 0.485
CVAR_0982
Hypothetical protein; Predicted acetyltransferase.
  
    0.482
ectP
Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.470
CVAR_2906
Putative membrane protein; ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
    0.462
CVAR_2692
Hypothetical protein; Predicted nucleoside-diphosphate sugar epimerase.
   
    0.442
CVAR_2838
Transposase for insertion sequence element.
   
    0.418
CVAR_3076
Transposase for insertion sequence element.
   
    0.418
CVAR_1111
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
    0.410
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.