Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1069Putative secreted protein; ATPase involved in DNA repair. (677 aa)    
Predicted Functional Partners:
CVAR_1135
Cytochrome b subunit of the bc complex.
    
   0.737
ctaC
Heme/copper-type cytochrome/quinol oxidases, subunit 2.
   
   0.735
ctaF
Cytochrome C oxidase subunit; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.693
ctaE
Heme/copper-type cytochrome/quinol oxidase, subunit 3.
    
   0.693
qcrC
Cytochrome c, mono- and diheme variants.
    
   0.693
mqo
Malate:quinone oxidoreductase; Predicted dehydrogenase.
  
 
   0.672
CVAR_1696
Hypothetical protein.
    
   0.631
CVAR_1071
Hypothetical protein; Belongs to the dGTPase family. Type 2 subfamily.
       0.620
CVAR_1070
Hypothetical protein.
       0.618
CVAR_2278
Putative secreted protein.
  
     0.605
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.