STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1218Hypothetical protein; Galactose-1-phosphate uridylyltransferase. (454 aa)    
Predicted Functional Partners:
CVAR_1263
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.804
CVAR_1217
Hypothetical protein; Metal- dependentamidase/aminoacylase/carboxypeptidase.
       0.781
galE
UDP-glucose 4-epimerase.
  
 
 0.769
CVAR_1219
Hypothetical protein.
       0.677
CVAR_2919
Putative membrane protein.
 
   
 0.656
CVAR_0928
Putative membrane protein.
  
     0.561
CVAR_1259
Hypothetical protein; Galactose mutarotase and related enzymes.
  
 
 0.555
rmlB
dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.507
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.