STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1263Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (404 aa)    
Predicted Functional Partners:
CVAR_1262
UDP-glucose-hexose-1- phosphateuridylyltransferase; Galactose-1-phosphate uridylyltransferase.
 0.999
CVAR_1259
Hypothetical protein; Galactose mutarotase and related enzymes.
 
 0.986
galE
UDP-glucose 4-epimerase.
 
 
 0.957
CVAR_1218
Hypothetical protein; Galactose-1-phosphate uridylyltransferase.
  
 
 0.804
CVAR_0985
Putative oxidoreductase; Predicted dehydrogenases and related proteins.
 
 
 0.773
ptsF
Phosphotransferase system, fructose-specific IIC component.
     
 0.713
ptsG
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.690
xylB
Xylulokinase; Glycerol kinase.
 
  
 0.649
CVAR_1260
Putative membrane protein; Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.619
CVAR_2068
UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase.
     
 0.611
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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