STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1304Putative membrane protein; Hemolysins and related proteins containing CBS domains. (345 aa)    
Predicted Functional Partners:
CVAR_1305
Putative membrane protein; Hemolysins and related proteins containing CBS domains.
 
   
0.912
CVAR_1303
Hypothetical protein.
       0.832
CVAR_1306
Hypothetical protein; Superfamily II DNA and RNA helicases.
       0.828
gnd
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.828
CVAR_1302
Hypothetical protein.
  
    0.734
CVAR_1308
Uncharacterized protein, possibly involved in aromatic compounds catabolism.
       0.654
CVAR_0120
Putative membrane protein; Hemolysins and related proteins containing CBS domains.
 
   
0.643
pitB
Phosphate/sulphate permeases.
 
   0.405
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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