STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1392DNA replication protein. (240 aa)    
Predicted Functional Partners:
CVAR_1393
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
 0.943
CVAR_1349
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
 0.796
CVAR_1370
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
 0.796
CVAR_1381
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
 0.796
CVAR_1897
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
 0.796
CVAR_2315
Hypothetical protein; Predicted ATP-dependent serine protease.
  
 
 0.642
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.642
CVAR_1391
Transposase for insertion sequence element; Transposase and inactivated derivatives.
  
    0.506
CVAR_1395
Hypothetical protein.
       0.469
CVAR_1396
Hypothetical protein.
       0.443
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.