STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1438Hypothetical protein. (284 aa)    
Predicted Functional Partners:
CVAR_2089
Hypothetical protein; Acyl dehydratase.
 
 
 0.710
hisEN
phosphoribosyl-ATP pyrophosphatase; Predicted phosphatase/phosphohexomutase.
       0.634
hisEC
Phosphoribosyl-ATP pyrophosphohydrolase.
       0.613
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.610
CVAR_1818
Hypothetical protein; NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
    0.491
aspA
Aspartate ammonia-lyase; Fumarase.
       0.475
citE
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
     0.458
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
   
 
 0.454
CVAR_2955
Transcriptional regulator.
  
     0.446
CVAR_2470
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1B family.
  
 
 0.428
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.