STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1560Putative secreted protein; Predicted iron-dependent peroxidase. (422 aa)    
Predicted Functional Partners:
CVAR_1561
Putative secreted protein; Uncharacterized protein conserved in bacteria.
 
  
 0.955
CVAR_1562
Putative secreted protein; Uncharacterized protein, homolog of Cu resistance protein CopC.
 
  
 0.945
CVAR_1772
Predicted periplasmic lipoprotein involved in iron transport.
 
  
 0.904
CVAR_1771
Hypothetical protein.
 
  
 0.876
CVAR_2599
Putative secreted protein; Uncharacterized protein conserved in bacteria.
 
  
 0.875
thrS
Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.674
CVAR_1557
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.639
CVAR_1558
Hypothetical protein; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.639
pimA
Glycosyltransferase.
       0.630
CVAR_1556
Hypothetical protein; Lauroyl/myristoyl acyltransferase.
       0.630
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.