STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgsA2Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (216 aa)    
Predicted Functional Partners:
CVAR_1557
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.959
cdsA
Phosphatidate cytidylyltransferase; CDP-diglyceride synthetase; Belongs to the CDS family.
    
 0.949
CVAR_1624
Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.
 
  
 0.917
CVAR_1989
Hypothetical protein; Phosphoserine phosphatase.
  
 
 0.906
CVAR_1626
Membrane protein TerC, possibly involved in tellurium resistance.
       0.720
CVAR_0463
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
 
  
 0.703
clgR
HTH3 DNA-binding transcription regulator.
       0.681
CVAR_1622
Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
     
 0.614
ftsK
Cell division protein; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
  
 0.574
CVAR_1628
Hypothetical protein.
     
 0.515
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.