STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVAR_1785Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (252 aa)    
Predicted Functional Partners:
fas
Fatty acid synthase; Enoyl reductase domain of yeast-type FAS1.
  
 0.993
CVAR_2643
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
 
0.915
CVAR_1233
Hypothetical protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
  0.911
CVAR_1758
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.672
pks13
Polyketide synthase modules and related proteins.
  
 
 0.600
uvrA2
UvrABC system protein A; Excinuclease ATPase subunit.
  
    0.594
CVAR_1844
Hypothetical protein; DNA repair exonuclease.
   
 
 0.567
fruK
1-phosphofructokinase; Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
  
  
 0.479
CVAR_0084
Putative secreted protein.
  
  
 0.469
glxR
Crp-family transcription regulator; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
   
 0.467
Your Current Organism:
Corynebacterium variabile
NCBI taxonomy Id: 858619
Other names: C. variabile DSM 44702, Corynebacterium variabile CIP 107183, Corynebacterium variabile DSM 44702, Corynebacterium variabile LMG S-19265, Corynebacterium variabile str. DSM 44702, Corynebacterium variabile strain DSM 44702
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